# Fast Estimation of Gaussian Mixture Copula Models

## Documentation for package ‘GMCM’ version 1.2.3

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

GMCM-package | Fast optimization of Gaussian Mixture Copula Models
choose.theta | Heuristically chosen starting value of theta
dmvnormal | Multivariate Gaussian density and simulation
EMAlgorithm | EM algorithm for Gaussian mixture models
fit.full.GMCM | Unsupervised clustering using a general GMCM
fit.full.gmcm | Unsupervised clustering using a general GMCM
fit.meta.GMCM | Reproducibility/meta analysis using GMCMs
fit.meta.gmcm | Reproducibility/meta analysis using GMCMs
freshVsFrozen | Reproducibility between Fresh and Frozen B-cell subtypes
full2meta | Convert between parameter formats
get.IDR | Posterior class probabilities, local, and adjusted IDRs.
get.idr | Posterior class probabilities, local, and adjusted IDRs.
get.prob | Posterior class probabilities, local, and adjusted IDRs.
GMCM | Fast optimization of Gaussian Mixture Copula Models
is.theta | Check if parameters are valid
meta2full | Convert between parameter formats
rmvnormal | Multivariate Gaussian density and simulation
rtheta | Get random parameters for the Gaussian mixture (copula) model
SimulateGMCMData | Simulation from Gaussian mixture (copula) models
SimulateGMMData | Simulation from Gaussian mixture (copula) models
u133VsExon | Reproducibility between U133 plus 2 and Exon microarrays
Uhat | Fast ranking function