
 @Manual{R:2011,
    title = {R: A Language and Environment for Statistical Computing},
    author = {{R Development Core Team}},
    organization = {R Foundation for Statistical Computing},
    address = {Vienna, Austria},
    year = {2011},
    note = {{ISBN} 3-900051-07-0},
    url = {http://www.R-project.org/},
  }


@Article{Bouvier:2009,
  author =	 {Annie Bouvier and Kiên Kiêu and Katarzyna Adamczyk
                  and Hervé Monod},
  title =	 {Computation of the integrated flow of particles
                  between polygons},
  journal =	 {Environmental Modelling \& Software},
  year =	 2009,
  volume =	 24,
  number =	 7,
  pages =	 {843-849},
  keywords =	 {Califlopp, Computational geometry, Cubature, DCUTRI,
                  GENESYS model, Gene flow model, Integrated particle
                  flow},
  abstract =	 {To quantify the flow of particles over a
                  heterogeneous area, some models require the
                  integration of a pointwise dispersal function over
                  source and target polygons. This calculation is a
                  non-trivial task and may require a great deal of
                  computing time. In this paper, an efficient and
                  accurate algorithm is presented to integrate general
                  individual dispersal functions between pairs of
                  convex or non-convex polygons. Geometric
                  calculations are performed using standard tools from
                  computational geometry. Numerical integration is
                  then performed either by a grid method or by an
                  adaptive cubature method. The procedure is
                  illustrated with a case study. It is shown that the
                  cubature method is much more efficient than the grid
                  method and that its error estimates are
                  accurate. The algorithm is implemented in a C++
                  program, Califlopp},
  doi =		 {DOI: 10.1016/j.envsoft.2008.11.006},
  issn =	 {1364-8152},
  url =
                  {http://www.sciencedirect.com/science/article/B6VHC-4V5XP84-1/2/3bf54f587c26d8ea3df24a47e0a6d79d},
}




@MastersThesis{Papaix:2011,
  author =	 {J. Papaix},
  title =	 {Structure du paysage agricole et risque épidémique, une approche démo-génétique.},
  school =	 {ABIES},
  year =	 2011
}

@Article{Colbach1:2001,
  author = 	 {N. Colbach  and C. Clermont-Dauphin and J.M. Meynard},
  title = 	 {GeneSys: a model of the influence of cropping system
                  on gene escape from herbicide tolerant rapeseed crops
                  to rape volunteers. I. Temporal evolution of a population 
                  of rapeseed volunteers in a field},
  journal = 	 {Agriculture, Ecosystems and Environnement},
  year = 	 2001,
  volume =	 83,
  pages =	 {235--253}
}

@Article{Colbach2:2001,
  author = 	 {N. Colbach  and C. Clermont-Dauphin and J.M. Meynard},
  title = 	 {GeneSys: a model of the influence of cropping system
                  on gene escape from herbicide tolerant rapeseed crops
                  to rape volunteers. II. Genetic exchanges among volunteer and cropped populations in a small region.},
  journal = 	 {Agriculture, Ecosystems and Environnement},
  year = 	 2001,
  volume =	 83,
  pages =	 {255-270}
}

@Article{Conroy:1967,
  author = 	 {Conroy, H.},
  title = 	 {Molecular Schr\"odinger
  equation VIII. A new method for evaluating multidimensional
  integrals},
  journal = 	 {J.\ Chem.\ Phys.},
  year = 	 1967,
  volume =	 47,
  pages =	 {5307--5318}
}

@Article{Cranley:1976,
  author = 	 {Cranley, R. and Patterson, T.N.L.},
  title = 	 {Randomisation of number theoretic methods for multiple
  integration},
  journal = 	 {SIAM.\ J.\ Num.\ Anal.},
  year = 	 1976,
  volume =	 13,
  pages =	 {904--914}
}

@Book{deBerg:2000,
  author =	 {de Berg, Mark and van Kreveld, Marc and Overmars, Mark 
                  and Schwartzkopf, Otfried},
  title = 	 {Computational Geometry: Algorithms and Applications},
  publisher = 	 {Springer-Verlag},
  year = 	 2000,
  edition =	 {Second  Edition}
}

@Article{Devaux:2006,
author = {Devaux, C. and Lavigne, C. and Austerlitz, F. and Klein, E.K.},
title = 	 {Modelling and estimating pollen movement in oilseed rape (\textit{Brassica napus}) at the landscape scale using genetic markers},
 year = 2006,
  journal = 	 {Molecular Ecology}
}

@Article{Genz:1980,
  author = 	 {Genz, A.C. and Malik, A.A.},
  title = 	 {An adaptive algorithm for numerical integration over an
  $N$-dimensional rectangular region},
  journal = 	 {J. Comput. Appl. Math.},
  year = 	 1980,
  volume =	 6,
  pages =	 {295--302}
}

@PhdThesis{Klein:2000,
  author = 	 {Klein, E.},
  title = 	 {Estimation de la fonction de dispersion du pollen.
                  Application à la dissémination de transgènes dans 
                  l'environnement},
  school = 	 {Université PARIS XI Orsay},
  year = 	 2000,
  type =	 {Thèse de doctorat}
}

@Article{Klein:2006,
  author = 	 {Klein, E.K. and Lavigne, C. and Picault, H. and Renard, M. and Gouyon, P.H.},
year = 2006,
title= {Pollen dispersal of oilseed rape: estimation of the dispersal function and effects of field dimensions},
journal = {Applied Ecology},
volume = 43,
pages = {1141--1151}
}

@Article{Korobov:1957,
  author = 	 {Korobov, N.M.},
  title = 	 {The approximate
  calculation of multiple integrals using number theoretic
  methods},
  journal = 	 {Dkl.\ Acad.\ Nauk.\ SSSR},
  year = 	 1957,
  volume =	 115,
  pages =	 {1062--1065}
}


@Book{Korobov:1963,
  author = 	 {Korobov, N.M.},
  title = 	 {Number Theoretic Methods in Approximate Analysis},
  publisher= 	 {Fizmatgiz},
  year = 	 1963,
  address =	 {Moscow}
}

@Article{Kuonen,
  author = 	 {Kuonen, Diego},
  title = 	 {Numerical integration in {S-PLUS} or {R}: a survey},
  journal = 	 {Journal of Statistical Software},
  year = 	 2003,
  volume =	 8,
  number =	 13,
  note =	 {\\URL: \path|http://www.jstatsoft.org/v08/i13/article.eps|}
}

@Article{Matsumoto:1998,
author = {M. Matsumoto and T. Nishimura},
title={Mersenne Twister: A 623-Dimensionally Equidistributed Uniform  
Pseudo-Random Number Generator},
journal={ACM Transactions on Modeling and Computer Simulation},
year=1998,
volume =8,
number=1,
pages={3--30}
}


@Manual{NAG,
  title = 	 {The NAG Fortran Library},
  note =	 {\\URL: \path|http://nag.co.uk/numeric/fl/FLdescription.asp|}
}

@Book{ORourke:1998,
  author =	 {O'Rourke, Joseph},
  title = 	 {Computational Geometry in {C}},
  publisher = 	 {Cambridge University Press},
  year = 	 1998,
  edition =	 {Second edition},
  note =	 {Supplementary material \path|http://maven.smith.edu/~orourke/books/compgeom.html|}
}

@Book{Press:1988,
  author =	 {Press, W.H. and Flannery, B.P. and Teukolsky, S.A. and 
                  Vettering, W.T.},
  title = 	 {Numerical Recipes in {C}},
  publisher = 	 {Cambridge University Press},
  year = 	 1988
}

@Book{Preparata:1988,
  author =	 {Preparata, Franco P. and Shamos, Michael I.},
  title = 	 {Computational Geometry: an Introduction},
  publisher = 	 {Springer-Verlag},
  year = 	 1988,
  edition =	 {Second Edition}
}

@Misc{REFR,
  author = {CRAN},
  title =	 {R: a free software environment for statistical
                  computing and graphics},
  howpublished = {URL: \path|http://www.r-project.org/|}
}

@Article{vanDoren:1976,
  author = 	 {van Doren, A. and de Ridder, L.},
  title = 	 {An adaptive  algorithm for numerical integration over an 
                  $n$-dimensional cube},
  journal = 	 {J. Comput. Appl. Math.},
  year = 	 {1976)},
  volume =	 2,
  pages =	 {207--217}
}

@MastersThesis{Ying:2005,
  author = 	 {Fu Y.},
  title = 	 {Méthodes d'intégration pour le calcul des flux
      de gènes entre parcelles dans un paysage agricole},
  school = 	 {\'Ecole Centrale de Nantes},
  year = 	 2005,
  note =	 {Mémoire de stage, Unité INRA MIA, Jouy-en-Josas}
}

