Big_data                Example infile for diveRsity package
SNPs                    Example input format for 'snp2gp' function
Test_data               Example infile for diveRsity package
arp2gen                 Fast and simple conversion of arlequin (.arp)
                        genotype files to genepop files, form within
                        the 'R' environment.
basicStats              Claculate basic descriptive population
                        parameters from a genepop genotype file
bigDivPart              Genetic differentiation statistics and their
                        estimators for high throughput data (e.g.
                        RAD-seq derived SNPS)
chiCalc                 Testing sample independence from genotype
                        counts
corPlot                 A function to plot the relationship between
                        Gst, G'st, Theta, D (Jost) and the mean number
                        of alleles at a locus. A reimplementation of
                        'corPlot'. This function will replace the old
                        function in later version of the package.
diffCalc                A faster function for calculating genetic
                        differentiation statistics
diffPlot                A function to plot pairwise statistics
                        calculated by divPart.
divBasic                A function to calculate basic population
                        parameters such as allelic richness, observed
                        heterozygosity, as well as expected
                        heterozygosity.
divMigrate              An experimental function for the detection of
                        directional differentiation from microsatellite
                        data.
divOnline               A function to launch a web app version of
                        'diveRsity' from the local system.
divPart                 Genetic differentiation statistics and their
                        estimators
divRatio                Calculates the standardised diversity ratios
                        relative to a 'yardstick' reference population
                        following Skrbinsek et al., 2012.
divSimCo                Similarity coefficients for co-dominant diploid
                        genenotype data
fastDivPart             Genetic differentiation statistics and their
                        estimators
fstOnly                 A minimal function for the calculate of Weir &
                        Cockerham's (1984) F_ST and F_IT from
                        codominant molecular data in the genepop
                        format.
gpSampler               Randomly sample a genepop file
haploDiv                A function, allowing the calculation of Weir &
                        Cockerham's (1984) F_{ST} from haploid
                        genotypes in the genepop
inCalc                  A function to calculate locus informative for
                        the inference of ancestry
microPlexer             Launches a 'shiny' app for the arrangement of
                        microsatellite loci into size and fluorophore
                        based multiplex groups.
polyIn                  A function for calculating informativeness for
                        the inference of ancestry from loci of any
                        ploidy.
pop_stats               Example pop_stats data frame for use in the
                        function 'divRatio'
readGenepop             A function to calculate allele frequencies from
                        genepop files.
snp2gen                 Conversion function for SNP nucleotide genotype
                        matrix to a genepop file.
