# Tools for Ecological Network Analysis

## Documentation for package ‘enaR’ version 2.9.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

enaR-package | Tools for Ecological Network Analysis (ena)
as.bipartite | Create a bipartite network.
as.extended | Create an Extended Format Matrix
bal | Subfunction for Balancing by Either Inputs or Outputs
balance | Balance Flow Network Models
bcratio | Calculates the Ratio of Positive to Negative Elements in a Network
bgcModels | Bigeochemical Cycling Models
cycliv | Analysis of Feeding Cycles in a Network
eigenCentrality | Calculates the Eigen Centrality of a Network
enaAll | Conduct All Major ENA
enaAscendency | Calculates the Ascendency of an Ecological Network
enaControl | Control Analyses of Ecological Networks
enaCycle | Full Cycle Analysis of Ecological Networks
enaEnviron | Ecological Network Environs
enaFlow | Flow Analyses of Ecological Networks
enaModelInfo | Ecosystem Model Information
enaModels | Ecosystem Models
enaMTI | Mixed Trophic Impacts (MTI) Analysis
enaR | Tools for Ecological Network Analysis (ena)
enaStorage | Storage Analyses of Ecological Networks
enaStructure | Structure Analyses of Ecological Network
enaTroAgg | Trophic Aggregations (TroAgg) Analysis
enaUtility | Utility Analysis of Ecological Networks
environCentrality | Environ Centrality an Ecological Network
findPathLength | Cumulative Flow over a Range of Path Lengths
force.balance | Repeated Application the Balance Function
get.ns | Quick Calculation of a Range of Network Statistics.
get.orient | Get the Current Global Matrix Orientation Setting
m.list | Sub-set of the Larger Ecosystem Models
mExp | Calculates the Exponent of a Matrix
netOrder | Reorder Nodes in a Network in enaR
oyster | Intertidal Oyster Reef Ecosystem Model
pack | Compile Network Information into a Network Class
read.enam | Read ENA Model from an Mdloti Formatted Excel File
read.nea | Read NEA Formatted Network Model
read.scor | Read SCOR Formatted Model
read.wand | Read WAND Formatted Model
scc | Find the Strongly Connected Component (SCC) in a Graph
scifix | Standardizes Scientific Notation from SCOR Formatted Files
set.orient | Globally Set the Output Matrix Orientation
ssCheck | Checks the Balance of Inputs and Outputs from a Network
structure.statistics | Structural Statistics of an Ecological Network
TES | Calculate the Total Environ Storage
TET | Calculates the Total Environ Throughflow for a Ecosystem Network Model
troModels | Trophic Models
unpack | "Unpacks" the Network Object into Separate Objects
write.EcoNet | Write enaR models to an EcoNet formatted file.
write.nea | Write a Network Object to File Using the NEA Data Format