# Calculating Proportionality Between Vectors of Compositional Data

## Documentation for package ‘propr’ version 2.0.4

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

bokeh | Make Bokeh Plot
bucket | Make Bucket Plot
caneToad.counts | Example Cane Toad Count Data
caneToad.groups | Example Cane Toad Group Data
dendrogram | The propr Package
mds | Make MDS Plot
perb | Calculate proportionality metric rho.
phit | Calculate proportionality metric phi.
plot-method | The propr Package
plotCheck | Plot Check
prism | Make Prism Plot
propr | The propr Package
propr-class | An S4 class to hold results from proportionality analysis.
proprALR | Calculates the additive log-ratio transformation.
proprCLR | Calculates the centered log-ratio transformation.
proprPairs | Recasts proportionality matrix as a table of feature pairs.
proprPerb | Calculate proportionality metric rho (Erb 2016).
proprPhit | Calculate proportionality metric phi (Lovell 2015).
proprSym | Symmetrizes a proportionality matrix.
proprTri | Retrieve the lower left triangle of a proportionality matrix.
proprVLR | Calculates the variance of the log of the ratios.
show-method | The propr Package
simplify | Simplify Indexed Matrix
slate | Build 'propr' Table
snapshot | Make Snapshot Plot
subset-method | The propr Package
top | Example propr Object
[-method | The propr Package