citHeader("To cite protViz in publications use:")

citEntry(entry = "Article",
  title        = "{PTM MarkerFinder}, a software tool to detect and validate spectra from peptides carrying post-translational modifications.",
  author       = personList(as.person("Paolo Nanni"),
                   as.person("Christian Panse"),
                   as.person("Peter Gehrig"),
                   as.person("Susanne Mueller"),
                   as.person("Jonas Grossmann"),
                   as.person("Ralph Schlapbach")),
  journal = "PROTEOMICS",
  year         = "2013",
  volume       = "13",
  number       = "15",
  pages        = "2251-2255",
  doi = "10.1002/pmic.201300036 ",
  url = "http://dx.doi.org/10.1002/pmic.201300036",

  textVersion  = paste("Nanni P, Panse C, Gehrig P, Mueller S, Grossmann J, Schlapbach R. (2013)",
	"PTM MarkerFinder, a software tool to detect and validate spectra from peptides carrying post-translational modifications.",
	"PROTEOMECS. 2013 Aug;13(15):2251-5. DOI:10.1002/pmic.201300036. Epub 2013 Jul 1.")
)

citEntry(entry = "Article",
         title = "{spec{L} - {A}n {R}/{B}ioconductor package to prepare peptide spectrum matches for use in targeted proteomics}",
         author = c(person("Christian", "Panse"),
                    person("Christian", "Trachsel"),
                    person("Jonas", "Grossmann"),
                    person("Ralph", "Schlapbach")),
         journal="Bioinformatics",
         pages = "2228-2231",
         month = "Feb",
         year = 2015,
         doi = "10.1093/bioinformatics/btv105",
         url = "http://dx.doi.org/10.1093/bioinformatics/btv105",
         
         textVersion = paste("Panse C, Trachsel C, Grossmann J and Schlapbach R. (2015).",
          "specL - An R/Bioconductor package to prepare peptide spectrum matches for use in targeted proteomics.",
          "Bioinformatics. DOI:10.1093/bioinformatics/btv105.")
)


citEntry(entry = "Article",
  title = "Implementation and evaluation of relative and absolute quantification in shotgun proteomics with label-free methods ",
  author = c(person("Jonas", "Grossmann"),
    person("Bernd", "Roschitzki"),
    person("Christian", "Panse"),
    person("Claudia", "Fortes"),
    person("Simon", "Barkow-Oesterreicher"),
    person("Dorothea","Rutishauser"),
    person("Ralph", "Schlapbach")),
journal = "Journal of Proteomics",
volume = "73",
number = "9",
pages = "1740 - 1746",
year = "2010",
issn = "1874-3919",
doi = "10.1016/j.jprot.2010.05.011",
url = "http://www.sciencedirect.com/science/article/pii/S1874391910001703",

textVersion = paste("Grossmann J, Roschitzki B, Panse C, Fortes C, Barkow-Oesterreicher S, Rutishauser D, Schlapbach R. (2010).",
"Implementation and evaluation of relative and absolute quantification in shotgun proteomics with label-free methods.",
"J Proteomics. 2010 Aug 5;73(9):1740-6. DOI:10.1016/j.jprot.2010.05.011. Epub 2010 May 31.")
)



