Package: sybilccFBA
Type: Package
Title: Cost Constrained FLux Balance Analysis: MetabOlic Modeling with
        ENzyme kineTics (MOMENT)
Version: 2.0.0
Date: 2015-04-01
Authors@R: c(person("Abdelmoneim", "Amer Desouki", role = c("aut","cre"), email = "abdelmoneim.amer@uni-duesseldorf.de"))
Depends: R (>= 2.10.0), sybil, Matrix
Suggests: cplexAPI (>= 1.2.6), glpkAPI (>= 1.2.1)
Description: An implementation of a cost constrained flux balance analysis technique (i.e. MetabOlic Modeling with ENzyme kineTics (MOMENT)).
             MOMENT uses enzyme kinetic data and enzyme molecular weights to constrain flux balance analysis(FBA) and it is described in 
			 Adadi, R., Volkmer, B., Milo, R., Heinemann, M., & Shlomi, T. (2012). Prediction of Microbial Growth Rate versus Biomass 
			 Yield by a Metabolic Network with Kinetic Parameters, 8(7). doi:10.1371/journal.pcbi.1002575. 
             This package also implements an improvement of MOMENT that considers multi-functional enzymes. 
			 FBA is a mathematical technique to find fluxes in metabolic models at steady state. 
			 It is described in Orth, J.D., Thiele, I. and Palsson, B.O.  What is flux balance analysis? Nat. Biotech. 28, 245-248(2010).
LazyLoad: yes
License: GPL-3
Packaged: 2015-04-02 10:30:29 UTC; Abdelmonem
Author: Abdelmoneim Amer Desouki [aut, cre]
Maintainer: Abdelmoneim Amer Desouki
 <abdelmoneim.amer@uni-duesseldorf.de>
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-04-02 17:52:06
Built: R 3.3.2; ; 2016-12-02 03:42:46 UTC; windows
